MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,120
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 2,180
Total number of protein coding genes annotated/found:
2,120
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5022|JADGKV010000010.1
SEQF5022_00001
Genome Viewer
NA
AA
594/198
189-782
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00002
Genome Viewer
NA
AA
462/154
767-1228
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00003
Genome Viewer
NA
AA
762/254
1531-2292
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00004
Genome Viewer
NA
AA
846/282
2270-3115
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00005
Genome Viewer
NA
AA
1014/338
3376-4389
Melibiose carrier protein
SEQF5022|JADGKV010000010.1
SEQF5022_00006
Genome Viewer
NA
AA
2139/713
4402-6540
Alpha-galactosidase
SEQF5022|JADGKV010000010.1
SEQF5022_00007
Genome Viewer
NA
AA
270/90
6862-6593
Putative sulfur carrier protein YedF
SEQF5022|JADGKV010000010.1
SEQF5022_00008
Genome Viewer
NA
AA
1224/408
8118-6895
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00009
Genome Viewer
NA
AA
576/192
9051-8476
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00010
Genome Viewer
NA
AA
318/106
9478-9161
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00011
Genome Viewer
NA
AA
483/161
9979-9497
Thiol-disulfide oxidoreductase ResA
SEQF5022|JADGKV010000010.1
SEQF5022_00012
Genome Viewer
NA
AA
672/224
10640-9969
Lipoprotein-releasing system ATP-binding protein LolD
SEQF5022|JADGKV010000010.1
SEQF5022_00013
Genome Viewer
NA
AA
1134/378
11826-10693
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00014
Genome Viewer
NA
AA
1329/443
13144-11816
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00015
Genome Viewer
NA
AA
1407/469
14553-13147
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00016
Genome Viewer
NA
AA
519/173
15187-14669
34 kDa membrane antigen
SEQF5022|JADGKV010000010.1
SEQF5022_00017
Genome Viewer
NA
AA
1896/632
17106-15211
hypothetical protein
SEQF5022|JADGKV010000010.1
SEQF5022_00018
Genome Viewer
NA
AA
948/316
18215-17268
Ribose-phosphate pyrophosphokinase
SEQF5022|JADGKV010000010.1
SEQF5022_00019
Genome Viewer
NA
AA
918/306
19150-18233
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SEQF5022|JADGKV010000010.1
SEQF5022_00020
Genome Viewer
NA
AA
621/207
19770-19150
Outer-membrane lipoprotein LolB
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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